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5038b21226
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add starter maven thingy
apes https://ryantm.github.io/nixpkgs/languages-frameworks/maven/
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2026-02-22 11:27:37 -06:00 |
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19066e7370
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make blank files for nix testing
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2026-02-22 11:20:57 -06:00 |
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cjmyers
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a170e0e1e0
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Merge pull request #643 from MyersResearchGroup/fixModelGen
Fix issues with model generation libraries
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2025-12-23 10:00:18 -07:00 |
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Chris Myers
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9de95ab6eb
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Fix issues with model generation libraries
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2025-12-23 09:59:23 -07:00 |
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Chris Myers
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d4d40a9084
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Merge branch 'master' of https://github.com/MyersResearchGroup/iBioSim
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2024-11-26 20:28:24 -07:00 |
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Chris Myers
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b11268ec9c
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Updated to suppot later Java versions
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2024-11-26 20:27:58 -07:00 |
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cjmyers
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bd6703583f
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Merge pull request #628 from MyersResearchGroup/UpdateREADME
Update README.md
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2023-03-28 08:58:41 -06:00 |
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cjmyers
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d81e0d7532
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Merge pull request #627 from MyersResearchGroup/sbml-to-prism
Merge of SBML2PRISM converter
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2023-03-28 08:58:07 -06:00 |
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cjmyers
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484ae5d58e
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Merge branch 'master' into sbml-to-prism
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2023-03-28 08:57:59 -06:00 |
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LukasBuecherl
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a3623c4a34
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Update README.md
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2023-03-28 15:15:11 +01:00 |
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LukasBuecherl
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7e8f2e6f9f
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Print props file
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2023-03-28 15:11:14 +01:00 |
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LukasBuecherl
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2674494894
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Working
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2023-03-06 12:20:29 +00:00 |
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Chris Myers
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040aa01d2f
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Address exception saving movie preferences
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2022-10-09 04:00:37 -06:00 |
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Chris Myers
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f74c41aa59
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Added a few null pointer checks
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2022-10-02 16:59:34 -06:00 |
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LukasBuecherl
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4944baf71b
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Run.java update
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2022-09-21 08:53:50 -06:00 |
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LukasBuecherl
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4bf6c6e1e6
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Refactor code for SBML2PRISM
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2022-07-25 14:27:39 -06:00 |
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LukasBuecherl
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a93e650de2
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refactor
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2022-07-25 13:39:02 -06:00 |
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LukasBuecherl
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8cffc3062b
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Flatten works
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2022-07-25 13:28:58 -06:00 |
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LukasBuecherl
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1c24b1edc5
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Initial work on hierarchy support
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2022-07-21 14:08:19 -06:00 |
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LukasBuecherl
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927062edeb
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Bound/Unbound option is now available and works
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2022-07-20 09:26:09 -06:00 |
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LukasBuecherl
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b8cad2fe48
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Added comments to SBML2PRISM
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2022-07-14 13:15:28 -06:00 |
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LukasBuecherl
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5453e5031d
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Updated Conversion
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2022-07-14 12:53:08 -06:00 |
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LukasBuecherl
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75911f5931
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FirstDraft
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2022-06-24 06:42:38 +02:00 |
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Chris Myers
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88d02ca2d4
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Fix default model conversion parameters
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2022-06-23 17:12:47 -06:00 |
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LukasBuecherl
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b435eb5c87
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Updated Files for the Translator
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2022-06-02 15:17:02 -06:00 |
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Chris Myers
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518bbc1383
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Update jsbml
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2022-05-19 06:37:25 -06:00 |
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Chris Myers
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73196545f6
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Updated JSBML
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2022-04-21 16:25:26 -06:00 |
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Chris Myers
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6217a830fb
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Merge branch 'master' of https://github.com/MyersResearchGroup/iBioSim.git
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2022-04-20 16:41:33 -06:00 |
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Chris Myers
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c4ac7ea0ed
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Added debug
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2022-04-20 16:41:17 -06:00 |
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Pedro Fontanarrosa
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2adf6d6425
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Update Converter.java
Fixed trying to read a document without specifying outputdir
Fixed code trying to read only .xml and not also .sbol files
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2022-04-18 12:15:35 -04:00 |
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Chris Myers
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b6aa5bf573
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Merge branch 'master' of https://github.com/MyersResearchGroup/iBioSim.git
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2022-03-31 15:31:21 -06:00 |
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Chris Myers
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7672cd24b9
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Added stub code
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2022-03-31 15:31:04 -06:00 |
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Pedro Fontanarrosa
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c2f67b7035
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Update Converter.java
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2022-03-18 12:18:26 -06:00 |
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Chris Myers
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fce1d9b464
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Merge branch 'master' of https://github.com/MyersResearchGroup/iBioSim.git
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2022-03-17 17:50:43 -06:00 |
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Chris Myers
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f94c30f85b
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Add topModelId field
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2022-03-17 17:50:20 -06:00 |
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LukasBuecherl
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ef759e77c6
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Update Dockerfile
Updated Dockerfile to find Dependencies
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2022-01-26 15:49:15 -07:00 |
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LukasBuecherl
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f3a18eba52
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Update Dockerfile
Fixed error to move the repository into the right directory
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2022-01-26 11:57:49 -07:00 |
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LukasBuecherl
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057df25663
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Update Dockerfile
Changing iBioSim install location
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2022-01-26 11:54:06 -07:00 |
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LukasBuecherl
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ab21a08270
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Delete del.txt
Deleted del.txt
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2022-01-18 13:46:37 -07:00 |
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LukasBuecherl
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35d97a1341
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Update Dockerfile
Another one
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2022-01-18 13:45:13 -07:00 |
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LukasBuecherl
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de0ecf7e13
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Add files via upload
Added dependencies
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2022-01-18 13:42:29 -07:00 |
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LukasBuecherl
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368948b360
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Create del.txt
Adding dependencies
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2022-01-18 13:41:36 -07:00 |
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LukasBuecherl
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fce98c6417
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Update Dockerfile
There is always money in the banana stand
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2022-01-18 13:36:06 -07:00 |
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LukasBuecherl
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1a1973f0dc
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Update Dockerfile
Still fixing Dockerfile
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2022-01-18 13:26:04 -07:00 |
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LukasBuecherl
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7038459437
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Update Dockerfile
All good errors persist
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2022-01-18 13:19:10 -07:00 |
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LukasBuecherl
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16685f32a8
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Update Dockerfile
There is another syntax error
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2022-01-18 13:16:47 -07:00 |
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LukasBuecherl
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f3a3bd0f07
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Update Dockerfile
Another syntax fix
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2022-01-18 13:13:24 -07:00 |
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LukasBuecherl
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4a5f92c89a
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Update Dockerfile
Fixed syntax error
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2022-01-18 13:09:50 -07:00 |
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JMante1
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b763695c4a
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Merge pull request #621 from MyersResearchGroup/LukasBuecherl-docker-image
Create main.yml
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2022-01-18 13:07:17 -07:00 |
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LukasBuecherl
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e5ba0379df
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Create Dockerfile
Dockerfile to create an iBioSim image
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2022-01-18 12:51:55 -07:00 |
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