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Added dependencies

Dependencies/newbuild.sh

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+#!/bin/bash
+
+BUILD_DIR=$PWD
+ROOT=/iBioSim
+
+tar -xf libSBML-5.15.2-core-plus-packages-src.tar.gz
+tar -xf gsl-latest.tar.gz
+tar -xf GeneNet.tar.gz
+tar -xf reb2sac.tar.gz
+
+# Install gsl
+cd ${BUILD_DIR}/gsl-2.4
+./configure --prefix=${ROOT} --quiet
+make --quiet
+make install --quiet
+
+# Install libsbml
+cd ${BUILD_DIR}/libSBML-5.15.2-Source
+./configure --prefix=${ROOT} --with-java --enable-comp --quiet
+make --quiet; make --quiet
+make install --quiet
+
+# Install GeneNet
+cd ${BUILD_DIR}/GeneNet
+make --quiet
+cp bin/GeneNet ${ROOT}/bin/GeneNet.linux64
+cp ${ROOT}/bin/GeneNet.linux64 ${ROOT}/bin/GeneNet
+
+
+# Install reb2sac
+cd ${BUILD_DIR}/reb2sac
+CFLAGS="-I${ROOT}/include -O0 -g3 -DNAME_FOR_ID" LDFLAGS="-L${ROOT}/lib -lm" ./configure --prefix=${ROOT}/ && \
+    env WANT_AUTOCONF_2_5="1" WANT_AUTOMAKE_1_6="1" make -k -j1 install
+cp ${ROOT}/bin/reb2sac ${ROOT}/bin/reb2sac.linux64