| .. |
|
.cvsignore
|
update
|
2010-09-14 18:38:42 +00:00 |
|
apply_post_filter.pl
|
Put back bin directory.
|
2008-07-24 04:57:12 +00:00 |
|
ATACSGUI.bat
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
ATACSGUI.linux
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
ATACSGUI.linux64
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
ATACSGUI.mac
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
ATACSGUI.mac64
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
autogenT.py
|
Now prints a correct .bins file even when one of the variables has only one bin division.
|
2009-04-02 21:17:57 +00:00 |
|
check_dot.pl
|
Put back bin directory.
|
2008-07-24 04:57:12 +00:00 |
|
checkHpn.pl
|
add
|
2010-02-16 18:11:26 +00:00 |
|
cir2data.py
|
Adding python scripts for Lema tool
|
2008-12-29 21:55:34 +00:00 |
|
cText.py
|
Adding python scripts for Lema tool
|
2008-12-29 21:55:34 +00:00 |
|
cText.pyc
|
Update
|
2010-01-22 19:57:07 +00:00 |
|
data2lhpn.py
|
GUI changes: upon completion of learning, a dialog is displayed instead of the lhpn model. Made partial changes to view menu. Fixed an issue related to absoluteTime check box. Made a temporary fix for duration ranges of dmv input nets.
|
2009-10-09 04:17:34 +00:00 |
|
gcm2sbml.pl
|
Put back bin directory.
|
2008-07-24 04:57:12 +00:00 |
|
gen_GeneNet_report.pl
|
Adding a pl file so that the background gcm file can be created from a run-1.tsd file
|
2009-03-13 22:15:07 +00:00 |
|
genBackgroundGCM.pl
|
Adding a pl file so that the background gcm file can be created from a run-1.tsd file
|
2009-03-13 22:15:07 +00:00 |
|
GeneNet.exe64
|
Added GeneNet for 64-bit Windows
|
2010-09-25 08:41:57 +00:00 |
|
iBioSim.bat
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
iBioSim.linux
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
iBioSim.linux64
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
iBioSim.mac
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
iBioSim.mac64
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
LEMA.bat
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
LEMA.linux
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
LEMA.linux64
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
LEMA.mac
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
LEMA.mac64
|
Updated to main.Gui
|
2011-02-02 18:22:07 +00:00 |
|
MSVCP71.DLL
|
Update to libsbml 4.0
|
2009-09-10 16:26:56 +00:00 |
|
msvcp90.dll
|
Update to libsbml 4.0
|
2009-09-10 16:26:56 +00:00 |
|
msvcr71.dll
|
Update to libsbml 4.0
|
2009-09-10 16:26:56 +00:00 |
|
msvcr90.dll
|
Update to libsbml 4.0
|
2009-09-10 16:26:56 +00:00 |
|
prereqs.perl
|
add
|
2010-02-16 17:14:33 +00:00 |
|
reb2sac.exe64
|
Added reb2sac for 64-bit Windows to the repository
|
2010-09-25 09:51:44 +00:00 |
|
remote.sh
|
A script for remote simulation.
|
2010-03-06 20:37:08 +00:00 |
|
remoteATACS.sh
|
update with /tmp
|
2010-03-10 20:41:02 +00:00 |
|
remoteTangATACS.sh
|
Scripts to sim and verify on Tang.
|
2010-03-19 21:32:35 +00:00 |
|
remoteTangSim.sh
|
Scripts to sim and verify on Tang.
|
2010-03-19 21:32:35 +00:00 |
|
xerces-c_2_7.dll
|
re add
|
2008-07-24 05:08:24 +00:00 |
|
xxatacs
|
Complex and sequestering abstractions are now handled by the AbstractionEngine class, which is called through the abstractExpression method of the GeneticNetwork class to create string kinetic laws and the abstractComplex and sequesterSpecies methods of the visitors to create sbml kinetic laws.
|
2011-03-18 19:55:36 +00:00 |