iBioSim/dataModels/pom.xml

<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
	<modelVersion>4.0.0</modelVersion>
	<artifactId>iBioSim-dataModels</artifactId>
	<parent>
		<groupId>edu.utah.ece.async</groupId>
		<artifactId>iBioSim</artifactId>
		<version>3.1.0-SNAPSHOT</version>
		<relativePath>../</relativePath>
	</parent>
	<packaging>jar</packaging>
	<repositories>
		<repository>
			<id>JSBML-SNAPSHOT</id>
			<name>The JSBML Snapshot repository</name>
			<url>https://oss.sonatype.org/content/repositories/snapshots/</url>
		</repository>
			<repository>
			<id>jboss</id>
			<name>jboss</name>
			<url>https://repository.jboss.org/nexus/content/repositories/thirdparty-releases/</url>
		</repository>
		<repository>
			<id>osgeo</id>
			<name>osgeo</name>
			<url>http://download.osgeo.org/webdav/geotools/</url>
		</repository>
		<repository>
			<id>alfresco</id>
			<name>alfresco</name>
			<url>https://artifacts.alfresco.com/nexus/content/repositories/public/</url>
		</repository>
	</repositories>
	<dependencies>
		<dependency>
			<groupId>org.antlr</groupId>
			<artifactId>antlr-runtime</artifactId>
			<version>3.4</version>
		</dependency>

		<!-- Needed for jlibsedml -->
		<dependency>
			<groupId>jaxen</groupId>
			<artifactId>jaxen</artifactId>
			<version>1.1.4</version>
			<exclusions>
            	<exclusion>
              	  <groupId>xml-apis</groupId>
                  <artifactId>xml-apis</artifactId>
           	 	</exclusion>
            	<exclusion>
                	<groupId>xerces</groupId>
  				    <artifactId>xercesImpl</artifactId>
            	</exclusion>
            	<exclusion>
                	<groupId>xom</groupId>
                	<artifactId>xom</artifactId>
            	</exclusion>
            	<exclusion>
                	<groupId>dom4j</groupId>
                	<artifactId>dom4j</artifactId>
            	</exclusion>
        	</exclusions>
		</dependency>
		
		<dependency>
			<groupId>xom</groupId>
			<artifactId>xom</artifactId>
			<version>1.2</version>
		</dependency>

		<dependency>
			<groupId>org.jdom</groupId>
			<artifactId>jdom-contrib</artifactId>
			<version>1.1.3</version>
		</dependency>

		<dependency>
			<groupId>org.sbml.jsbml</groupId>
			<artifactId>jsbml</artifactId>
			<version>1.7-SNAPSHOT</version>
		</dependency>

		<dependency>
			<groupId>net.sf.trove4j</groupId>
			<artifactId>trove4j</artifactId>
			<version>3.0.1</version>
		</dependency>
		<!-- Update SBOL JAR here. NOTE: Make sure to update the EXECUTION tag 
			up above for SBOL as well. -->
		<dependency>
			<groupId>org.sbolstandard</groupId>
			<artifactId>libSBOLj</artifactId>
			<version>2.4.1-SNAPSHOT</version>
			<exclusions>
            	<exclusion>
              	  <groupId>xml-apis</groupId>
                  <artifactId>xml-apis</artifactId>
           	 	</exclusion>
            	<exclusion>
                	<groupId>xerces</groupId>
  				    <artifactId>xercesImpl</artifactId>
            	</exclusion>
            	<exclusion>
                	<groupId>dom4j</groupId>
                	<artifactId>dom4j</artifactId>
            	</exclusion>
        	</exclusions>			
		</dependency>

		<!-- https://mvnrepository.com/artifact/org.apache.commons/commons-math3 -->
		<dependency>
    		<groupId>org.apache.commons</groupId>
    		<artifactId>commons-math3</artifactId>
    		<version>3.0</version>
		</dependency>

		<dependency>
			<groupId>org.jfree</groupId>
			<artifactId>jfreechart</artifactId>
			<version>1.0.14</version>
			<exclusions>
			   <exclusion>
             	  <groupId>xml-apis</groupId>
                  <artifactId>xml-apis</artifactId>
           	   </exclusion>
           	    <exclusion>
             	   <groupId>xml-apis</groupId>
                   <artifactId>xml-apis-ext</artifactId>
           	    </exclusion>
       		    <exclusion>
           			 <groupId>xerces</groupId>
            		 <artifactId>xercesImpl</artifactId>
        		</exclusion>
           	</exclusions>
		</dependency>
		
		<dependency>
			<groupId>org.apache.xmlgraphics</groupId>
			<artifactId>batik-dom</artifactId>
			<version>1.16</version>
			<exclusions>
        		<exclusion>
            		<groupId>xml-apis</groupId>
            		<artifactId>xml-apis</artifactId>
       			</exclusion>
			       <exclusion>
             	   <groupId>xml-apis</groupId>
                   <artifactId>xml-apis-ext</artifactId>
           	    </exclusion>
       			<exclusion>
           			 <groupId>xerces</groupId>
            		 <artifactId>xercesImpl</artifactId>
        		</exclusion>
   			</exclusions>			
		</dependency>

		<dependency>
			<groupId>org.apache.xmlgraphics</groupId>
			<artifactId>batik-svggen</artifactId>
			<version>1.16</version>
			<exclusions>
        		<exclusion>
            		<groupId>xml-apis</groupId>
            		<artifactId>xml-apis</artifactId>
       			</exclusion>
       			<exclusion>
           			 <groupId>xerces</groupId>
            		 <artifactId>xercesImpl</artifactId>
        		</exclusion>
   			</exclusions>
		</dependency>
		
		<dependency>
			<groupId>org.jmathml</groupId>
			<artifactId>jmathml</artifactId>
			<version>2.2.1</version>
		</dependency>
			
		<dependency>
    		<groupId>de.erichseifert.vectorgraphics2d</groupId>
   			<artifactId>VectorGraphics2D</artifactId>
    		<version>0.13</version>
		</dependency>

		<dependency>
            <groupId>org.jlibsedml</groupId>
            <artifactId>jlibsedml</artifactId>
            <version>2.3.0-SNAPSHOT</version>
            			<exclusions>
            	<exclusion>
              	  <groupId>xml-apis</groupId>
                  <artifactId>xml-apis</artifactId>
           	 	</exclusion>
            	<exclusion>
                	<groupId>xerces</groupId>
  				    <artifactId>xercesImpl</artifactId>
            	</exclusion>
            	<exclusion>
                	<groupId>xom</groupId>
                	<artifactId>xom</artifactId>
            	</exclusion>
            	<exclusion>
                	<groupId>jaxen</groupId>
                	<artifactId>jaxen</artifactId>
            	</exclusion>
        	</exclusions>
        </dependency>
        	
		<dependency>
            <groupId>edu.utah.ece.async</groupId>
            <artifactId>iBioSim-libsbml</artifactId>
            <version>5.18.0-SNAPSHOT</version>
        </dependency>
	</dependencies>
</project>